The UV absorption of nucleobases: semi-classical ab initio spectra simulations.

نویسندگان

  • Mario Barbatti
  • Adelia J A Aquino
  • Hans Lischka
چکیده

Semi-classical simulations of the UV-photoabsorption cross sections of adenine, guanine, cytosine, thymine, and uracil in gas phase were performed at the resolution-of-identity coupled cluster to the second-order (RI-CC2) level. With the exception of cytosine, the spectra of the other four nucleobases show a two band pattern separated by a low intensity region. The spectrum of cytosine is shaped by a sequence of three bands of increasing intensity. The first band of guanine is composed by two pipi* transitions of similar intensities. The analysis of individual contributions to the spectra allows a detailed assignment of bands. It is shown that the semi-classical simulations are able to predict general features of the experimental spectra, including their absolute intensities.

برای دانلود متن کامل این مقاله و بیش از 32 میلیون مقاله دیگر ابتدا ثبت نام کنید

ثبت نام

اگر عضو سایت هستید لطفا وارد حساب کاربری خود شوید

منابع مشابه

Rsc_cp_c001556c 4949..4958

The UV absorption of nucleobases: semi-classical ab initio spectra simulations Mario Barbatti, Adelia J. A. Aquino and Hans Lischka, Phys. Chem. Chem. Phys., 2010. DOI: 10.1039/b924956g Vibronic coupling in indole: I. Theoretical description of the La–Lb interaction and the electronic spectrum Christian Brand, Jochen Küpper, David W. Pratt, W. Leo Meerts, Daniel Krügler, Jörg Tatchen and Michae...

متن کامل

This paper is published as part of a PCCP theme issue series on biophysics and biophysical chemistry: Molecular Mechanisms of the Photostability of Life

The UV absorption of nucleobases: semi-classical ab initio spectra simulations Mario Barbatti, Adelia J. A. Aquino and Hans Lischka, Phys. Chem. Chem. Phys., 2010. DOI: 10.1039/b924956g Vibronic coupling in indole: I. Theoretical description of the La–Lb interaction and the electronic spectrum Christian Brand, Jochen Küpper, David W. Pratt, W. Leo Meerts, Daniel Krügler, Jörg Tatchen and Michae...

متن کامل

Ab Initio Theoretical Studies on the Kinetics of the Hydrogen Abstraction Reaction of Hydroxyl Radical with CH3CH2OCF2CHF2 (HFE-374pc2)

The hydrogen abstraction reaction of OH radical with CH3CH2OCF2CHF2 (HFE-374pc2) is investigated theoretically by semi-classical transition state theory. The stationary points on the potential energy surface of the reaction are located by using KMLYP density functional method along with 6-311++G(d,p) basis set. Vibrational anharmonicity coefficients, ...

متن کامل

AB Initio Calculations of NMR Spectra for H20114C9N4 As A New Nanosemiconductor Molecule

BCN compounds have been researched theoretically and experimentally widely. In this paper, weintroduce the theoretical prediction of ternary B-C-N compounds. NMR spectroscopy was employedextensively to study these ternary nanostructures. We discuss the utilization of chemical shiftinformation as well as ab initio calculations of nuclear shielding for H20134C9N4 structuredetermination. We calcul...

متن کامل

Molecular dynamics simulations for CO2 spectra. IV. Collisional line-mixing in infrared and Raman bands.

Ab initio calculations of the shapes of pure CO2 infrared and Raman bands under (pressure) conditions for which line-mixing effects are important have been performed using requantized classical molecular dynamics simulations. This approach provides the autocorrelation functions of the dipole vector and isotropic polarizability whose Fourier-Laplace transforms yield the corresponding spectra. Fo...

متن کامل

ذخیره در منابع من


  با ذخیره ی این منبع در منابع من، دسترسی به آن را برای استفاده های بعدی آسان تر کنید

برای دانلود متن کامل این مقاله و بیش از 32 میلیون مقاله دیگر ابتدا ثبت نام کنید

ثبت نام

اگر عضو سایت هستید لطفا وارد حساب کاربری خود شوید

عنوان ژورنال:
  • Physical chemistry chemical physics : PCCP

دوره 12 19  شماره 

صفحات  -

تاریخ انتشار 2010